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Selected Publications (Since 2004)

1. Verma M. and Kumar, D., Diagnosing Cancer Using Histone Modification Analysis. 2007 in Cancer Epigenetics, CRC Press (In Press)

2. Chauhan S.C., Jaggi, M., Bell, M., Verma, M and Kumar, D. Epidemiology of Human Papillomavirus (HPV) in cervical mucosa. 2007, in Cancer

Epidemiology, Ed. M. Verma, Humana Press (In Press)

3. Kumar, D and Verma, M. Methods in Cancer Epigenetics and Cancer Epidemiology. 2007 in Cancer Epidemiology, Ed. M. Verma, Humana Press (In

Press)

4. Verma, M. and Kumar, D. Application of mitochondrial genome information in cancer epidemiology. Clin Chim Acta. 2007, 383: 41-50

5. Verma, M., Naviaux R., Tanaka, M., Kumar, D., Franceschi C., and Singh, K. Mitochondrial DNA and Cancer Epidemiology. Cancer Res. 2007 67:

437-439

6. Chauhan S.C., Kumar D., Bell, M., Koch, R. and Verma M. Molecular Markers of Miscellaneous Primary and metastatic Tumors of the Uterine Cervix. Eur. J.

Gyn. Onc.2007. XXVIII: 5-14

7. Liang L., Mandal V., Lu, Yi and Kumar, D. Multi-dimensional Cluster Misclassification Test for Pathway Differential Analysis of Diabetes. 2007,

Proceedings of the First International Multi-Symposiums on Computer and Computational Sciences (IMSCCS). University of Iowa. IA.

8. Boudreau, H.E., Broustas, C.G., Gokhale, P.C., Kumar, D., Mewani, R., Rone J.D., Haddad, B.R., Ahmad, I and Kasid U. Expression of BRCC3, a novel

cell cycle regulated molecule, is associated with increased phosphor-ERK and cell proliferation. Int. J. Mol. Med, 2007, 19: 29.

9. Kumar D and Verma M. Molecular markers of cervical squamous cell carcinoma. CME Journal of Gynecologic Oncology 2006; 11: 41-60.

10. Zhang C, Pei J, Kumar D, Sakabe I, Boudreau HE, Gokhale PC, Kasid U. Antisense Oligonucleotides: Target Validation and Development of

Systemically-Delivered Therapeutic Nanoparticles. Methods Mol. Biol., 2006, 361: 163-186

11. Liang, L.R., Lu S., Wang, X., Lu, Y., Mandal, V., Patacsil, D and Kumar D. A Fuzzy-Set-Theory-Based Approach to Differential Gene Expression Data

Analysis. BMC J. Bioinformatics 2006, 7 (Suppl 4): S7

12. Srivastava, R., Kumar, D., Waskar, M.N., Sharma, M., Katoch, V.M. and Srivastava, B.S. Identification of a repetitive sequence belonging to a PPE gene of

Mycobacterium tuberculosis and its use in diagnosis of tuberculosis. J. Mol. Microbiol., 2006, 55:1071

13. Tian, S., Mewani, R., Kumar, D., Li, B., Danner, M., Ahmad, I., Rahman A., Notario, V., Dritschilo, A., Kasid, U.N., and Gokhale, P.C., Phosphorylation

and stabilization of X-linked inhibitor of apoptosis (XIAP) by Raf-1 kinase. Int. J. Oncol, 2006, 29: 861-867

14. Lu, Y., Lu, S., Liang, L. and Kumar D. FM-test: A Fuzzy Set Theory Based Approach for the Identification of Diabetes Genes. IEEE Symposium of

Computations in Bioinformatics and Bioscience, pp.48-55, Hangzhou, Zhejiang, China, June, 2006.

15. Liang L., Lu, S., Lu, Y., Dhawan P. and Kumar D. CM-test: An innovative divergence measurement and its application in diabetes gene expression data

analysis. IEEE International Conference on Granular Computing, Atlanta, GA, USA, pp.262-268, 2006.

16. Dritschillo A., Huang C.H., Rudin C., Marshall J., Collins B., Steinberg J., Wanaski S., Dul J., Sherman J., Zhang C., Kumar D., Gokhale PC., Ahmad A.,

Ahmad I. and Kasid U., Phase I study of liposome-encapsulated c-raf Antisense Oligodeoxyribonucleotide (LErafAON) infusion during radiation therapy in

patients with advanced malignancies. Clin. Cancer Res, 2006 12:1251-9)

17. Zhang C, Chakravarty D, Sakabe I, Mewani RR, Boudreau HE, Kumar D, Ahmad I, Kasid UN. Role of SCC-S2 in Experimental Metastasis and Modulation

of VEGFR-2, MMP-1, and MMP-9 Expression. Mol Ther. 2006, 13:947-55.

18. Rudin C.M., Marshall J., Huang C.H., Kindler H.L., Zhang C., Kumar D., Gokhale P., Kasid U. and Ratain M.J., Delivery of a liposome c-raf-1 antisense

oligonucleotide by weekly bolus dosing in patients with advanced solid tumors: a phase I study. Clin.Cancer. Res, 2004, 10:7244-7251.

19. Kumar D., Patel S., Whiteside TL and Kasid U. SCC-112 is a novel gene inducing apoptosis and a candidate tumor suppressor gene in human breast

cancer and renal cell carcinoma. Gene 2004 328: 187-196.

20. Kumar D., Gokhale P., Broustas C., Chakravarty D., Ahmad I., Whiteside T.L., Kasid U. Over expression of SCC-S2 leads to increased cell growth and

tumorigenicity in MDA-MB 435 breast cancer cells Oncogene, 2004 23: 612-616